EnhancerDB
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  3. rs190702962[chr6:11226009]
Enhancers that have rs190702962[chr6:11226009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190702962[chr6:11226009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11225998 11226017 PITX2 TRANSFAC yes 99866792
chr6 11226004 11226017 ZBTB18 JASPAR yes 99866793
chr6 11226005 11226017 PKNOX1 JASPAR yes 99866794
chr6 11226005 11226017 TGIF1 JASPAR yes 99866795
chr6 11226006 11226015 SNAI2 JASPAR yes 99866796
chr6 11226006 11226016 FIGLA JASPAR yes 99866797
chr6 11226006 11226016 ID4 JASPAR yes 99866798
chr6 11226006 11226016 TCF3 JASPAR yes 99866799
chr6 11226006 11226016 TCF4 JASPAR yes 99866800
chr6 11226008 11226017 ZEB1 JASPAR yes 99866801
chr6 11226008 11226018 TBX21 JASPAR yes 99866802
chr6 11226009 11226017 MGA JASPAR yes 99866803
chr6 11226009 11226017 TBX15 JASPAR yes 99866804
chr6 11226009 11226017 TBX1 JASPAR yes 99866805
chr6 11226009 11226017 TBX4 JASPAR yes 99866806
chr6 11226009 11226017 TBX5 JASPAR yes 99866807
chr6 11226009 11226019 TBR1 JASPAR yes 99866808
chr6 11226009 11226022 SMAD2 JASPAR yes 99866809
Genes associated with rs190702962[chr6:11226009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More