EnhancerDB
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  3. rs190711309[chr12:111875552]
Enhancers that have rs190711309[chr12:111875552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 111858009 111880135 enh2602
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190711309[chr12:111875552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 111875536 111875980 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21573759
chr12 111875536 111875980 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108059779
chr12 111875544 111875556 E2F8 JASPAR yes 123748833
chr12 111875545 111875559 GLIS2 JASPAR yes 123748834
chr12 111875545 111875559 GLIS3 JASPAR yes 123748835
chr12 111875545 111875560 ZIC3 JASPAR yes 123748836
Genes associated with rs190711309[chr12:111875552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More