EnhancerDB
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  3. rs190712285[chr1:27974016]
Enhancers that have rs190712285[chr1:27974016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190712285[chr1:27974016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27973564 27974823 ZNF143 GTRD no Epithelial (MCF-7) 107802609
chr1 27974003 27974018 ESR2 JASPAR yes 27717866
chr1 27974003 27974023 ESR1 JASPAR yes 27717867
chr1 27974010 27974021 ESRRA JASPAR yes 27717868
chr1 27974010 27974021 ESRRB JASPAR yes 27717869
chr1 27974012 27974022 RORA JASPAR yes 27717870
Genes associated with rs190712285[chr1:27974016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More