EnhancerDB
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  3. rs190739048[chr17:42190943]
Enhancers that have rs190739048[chr17:42190943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190739048[chr17:42190943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42190926 42190947 IRF1 JASPAR yes 54388916
chr17 42190928 42190943 STAT2 JASPAR yes 54388917
chr17 42190929 42190943 SPI1 JASPAR yes 54388918
chr17 42190929 42190950 ZNF263 JASPAR yes 54388919
chr17 42190932 42190953 ZNF263 JASPAR yes 54388920
chr17 42190936 42190946 NFATC3 JASPAR yes 54388921
chr17 42190938 42190944 ETS1 JASPAR yes 54388922
Genes associated with rs190739048[chr17:42190943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More