EnhancerDB
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  3. rs190796880[chr3:58028352]
Enhancers that have rs190796880[chr3:58028352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190796880[chr3:58028352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58028341 58028354 NFKB2 JASPAR yes 2668412
chr3 58028342 58028352 NFKB1 JASPAR yes 2668413
chr3 58028349 58028357 TBX15 JASPAR yes 2668414
Genes associated with rs190796880[chr3:58028352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More