EnhancerDB
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  3. rs190845916[chr12:46609994]
Enhancers that have rs190845916[chr12:46609994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
chr12 46609835 46610258 vista13215
VISTA
Transcript factors that have rs190845916[chr12:46609994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 21541050
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026933
chr12 46608286 46610116 ZNF274 GTRD no Bone Marrow (K562) 108026934
chr12 46609843 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541069
chr12 46609843 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026966
chr12 46609873 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541070
chr12 46609873 46610503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026967
chr12 46609912 46610596 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541071
chr12 46609912 46610596 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026968
chr12 46609924 46610444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541072
chr12 46609924 46610444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026969
chr12 46609928 46610173 SOX2 GTRD no Neural Stem Cells (H9) 21541073
chr12 46609928 46610173 SOX2 GTRD no Neural Stem Cells (H9) 108026970
chr12 46609947 46610467 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541074
chr12 46609947 46610467 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026971
chr12 46609951 46610373 RELA UCSC Txn Factor no Conserved 108026972
chr12 46609956 46610340 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21541075
chr12 46609956 46610340 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108026973
chr12 46609976 46609997 ZNF263 JASPAR yes 82394410
chr12 46609976 46609997 ZNF263 JASPAR yes 120604363
chr12 46609987 46609997 SP1 JASPAR yes 82394412
chr12 46609987 46609997 SP1 JASPAR yes 120604365
chr12 46609989 46609999 ZNF740 JASPAR yes 82394413
chr12 46609989 46609999 ZNF740 JASPAR yes 120604366
Genes associated with rs190845916[chr12:46609994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More