EnhancerDB
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  3. rs190852149[chr17:42174309]
Enhancers that have rs190852149[chr17:42174309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190852149[chr17:42174309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42174266 42174846 ZNF274 GTRD no Blood (GM12878) 21761869
chr17 42174266 42174846 ZNF274 GTRD no Blood (GM12878) 108261975
chr17 42174270 42174851 ZNF274 GTRD no Blood (GM12878) 21761870
chr17 42174270 42174851 ZNF274 GTRD no Blood (GM12878) 108261976
chr17 42174275 42174693 ZNF274 GTRD no Bone Marrow (K562) 21761871
chr17 42174275 42174693 ZNF274 GTRD no Bone Marrow (K562) 108261977
chr17 42174283 42174955 TCF7L2 GTRD no Colon (HCT116) 21761872
chr17 42174283 42174955 TCF7L2 GTRD no Colon (HCT116) 108261978
chr17 42174291 42174309 ESR1 JASPAR yes 54386587
chr17 42174291 42174309 ESR2 JASPAR yes 54386588
chr17 42174291 42174309 NR3C1 JASPAR yes 54386589
chr17 42174293 42174313 ESR1 JASPAR yes 54386591
chr17 42174305 42174323 RARA JASPAR yes 54386593
Genes associated with rs190852149[chr17:42174309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More