EnhancerDB
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  3. rs190860870[chr1:1786778]
Enhancers that have rs190860870[chr1:1786778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190860870[chr1:1786778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1786759 1786780 IRF1 JASPAR yes 26207369
chr1 1786760 1786781 IRF1 JASPAR yes 26207371
chr1 1786763 1786778 FOXP1 JASPAR yes 26207373
chr1 1786764 1786785 IRF1 JASPAR yes 26207374
chr1 1786765 1786780 FOXP1 JASPAR yes 26207375
chr1 1786765 1786786 IRF1 JASPAR yes 26207376
chr1 1786769 1786790 IRF1 JASPAR yes 26207377
chr1 1786770 1786785 FOXP1 JASPAR yes 26207378
chr1 1786770 1786791 IRF1 JASPAR yes 26207379
Genes associated with rs190860870[chr1:1786778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More