EnhancerDB
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  3. rs190925716[chr16:11401974]
Enhancers that have rs190925716[chr16:11401974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11382725 11409295 enh3884
Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs190925716[chr16:11401974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11400968 11403057 TCF7L2 GTRD no Colon (HCT116) 108181241
chr16 11400985 11403198 ZNF274 GTRD no Liver (HepG2) 21690404
chr16 11400985 11403198 ZNF274 GTRD no Liver (HepG2) 108181242
chr16 11401092 11404434 ZNF143 GTRD no Epithelial (MCF-7) 21690405
chr16 11401092 11404434 ZNF143 GTRD no Epithelial (MCF-7) 108181243
chr16 11401128 11404956 ZNF143 GTRD no Epithelial (MCF-7) 21690406
chr16 11401128 11404956 ZNF143 GTRD no Epithelial (MCF-7) 108181244
chr16 11401872 11402890 ZNF274 GTRD no Bone Marrow (K562) 108181245
chr16 11401923 11402851 ZNF274 GTRD no Liver (HepG2) 21690407
chr16 11401923 11402851 ZNF274 GTRD no Liver (HepG2) 108181246
chr16 11401934 11404174 ZNF143 GTRD no Epithelial (MCF-7) 21690408
chr16 11401934 11404174 ZNF143 GTRD no Epithelial (MCF-7) 108181247
chr16 11401936 11402962 ZBTB33 GTRD no Lung (A549) 108181248
chr16 11401967 11401988 ZNF263 JASPAR yes 9504349
chr16 11401968 11401989 ZNF263 JASPAR yes 9504350
chr16 11401972 11401989 RXRA JASPAR yes 9504351
Genes associated with rs190925716[chr16:11401974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More