EnhancerDB
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  3. rs190957081[chr17:880921]
Enhancers that have rs190957081[chr17:880921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs190957081[chr17:880921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 880604 881427 P63 GTRD no Skin (Keratinocyte) 21739059
chr17 880604 881427 P63 GTRD no Skin (Keratinocyte) 108227859
chr17 880818 881414 P63 GTRD no Skin (Keratinocyte) 21739060
chr17 880818 881414 P63 GTRD no Skin (Keratinocyte) 108227860
chr17 880907 880925 RARA JASPAR yes 52648394
chr17 880913 880925 MEF2B JASPAR yes 52648396
chr17 880913 880925 MEF2D JASPAR yes 52648397
chr17 880913 880927 POU1F1 JASPAR yes 52648398
chr17 880914 880924 MEF2A JASPAR yes 52648399
chr17 880920 880927 POU2F1 TRANSFAC yes 52648401
Genes associated with rs190957081[chr17:880921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More