EnhancerDB
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  3. rs190964061[chr15:67412946]
Enhancers that have rs190964061[chr15:67412946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 67361222 67430135 enh3672
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190964061[chr15:67412946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 67412730 67413503 ZNF143 GTRD no Epithelial (MCF-7) 21662720
chr15 67412730 67413503 ZNF143 GTRD no Epithelial (MCF-7) 108149624
chr15 67412744 67414692 ZBTB33 GTRD no Lung (A549) 108149625
chr15 67412786 67414911 ZBTB33 GTRD no Lung (A549) 108149626
chr15 67412829 67413350 ZNF143 GTRD no Epithelial (MCF-7) 21662721
chr15 67412829 67413350 ZNF143 GTRD no Epithelial (MCF-7) 108149627
chr15 67412857 67413395 ZNF143 GTRD no Epithelial (MCF-7) 21662722
chr15 67412857 67413395 ZNF143 GTRD no Epithelial (MCF-7) 108149628
chr15 67412946 67412965 RFX2 JASPAR yes 24210108
Genes associated with rs190964061[chr15:67412946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More