EnhancerDB
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  3. rs190968646[chr2:232537888]
Enhancers that have rs190968646[chr2:232537888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232537656 232538064 vista35172
VISTA
Transcript factors that have rs190968646[chr2:232537888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435737
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435738
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435739
chr2 232537558 232538019 CTCF UCSC Txn Factor no Conserved 108435743
chr2 232537598 232538195 TFAP2A UCSC Txn Factor no Conserved 108435744
chr2 232537602 232537930 TFAP2C UCSC Txn Factor no Conserved 108435745
chr2 232537881 232537891 HINFP JASPAR yes 22229932
chr2 232537881 232537891 HINFP JASPAR yes 81734742
Genes associated with rs190968646[chr2:232537888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More