EnhancerDB
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  3. rs190969047[chr1:154404045]
Enhancers that have rs190969047[chr1:154404045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs190969047[chr1:154404045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 21340445
chr1 154403076 154404287 ZNF274 GTRD no Blood (GM12878) 107832613
chr1 154403983 154404313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340446
chr1 154403983 154404313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832614
chr1 154403987 154404311 CEBPB UCSC Txn Factor no Conserved 107832615
chr1 154403987 154404311 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107832616
chr1 154404035 154404439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340447
chr1 154404035 154404439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832617
chr1 154404039 154404379 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21340448
chr1 154404039 154404379 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107832618
chr1 154404041 154404056 RUNX2 JASPAR yes 32292208
chr1 154404044 154404056 GLI2 JASPAR yes 32292209
Genes associated with rs190969047[chr1:154404045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More