EnhancerDB
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  3. rs191238618[chr19:5942723]
Enhancers that have rs191238618[chr19:5942723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs191238618[chr19:5942723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5942708 5942723 FOXP1 JASPAR yes 112246075
chr19 5942709 5942724 FOXP1 JASPAR yes 112246076
chr19 5942710 5942725 FOXP1 JASPAR yes 112246077
chr19 5942710 5942731 IRF1 JASPAR yes 112246078
chr19 5942711 5942726 FOXP1 JASPAR yes 112246079
chr19 5942711 5942732 IRF1 JASPAR yes 112246080
chr19 5942712 5942727 FOXP1 JASPAR yes 112246081
chr19 5942712 5942733 IRF1 JASPAR yes 112246082
chr19 5942713 5942728 FOXP1 JASPAR yes 112246083
chr19 5942713 5942734 IRF1 JASPAR yes 112246084
chr19 5942714 5942729 FOXP1 JASPAR yes 112246085
chr19 5942714 5942735 IRF1 JASPAR yes 112246086
chr19 5942715 5942730 FOXP1 JASPAR yes 112246087
chr19 5942715 5942736 IRF1 JASPAR yes 112246088
chr19 5942716 5942731 FOXP1 JASPAR yes 112246089
chr19 5942716 5942737 IRF1 JASPAR yes 112246090
chr19 5942717 5942732 FOXP1 JASPAR yes 112246091
chr19 5942719 5942734 FOXP1 JASPAR yes 112246092
chr19 5942720 5942735 STAT2 JASPAR yes 112246093
chr19 5942721 5942736 FOXP1 JASPAR yes 112246094
chr19 5942721 5942742 IRF1 JASPAR yes 112246095
chr19 5942723 5942735 FOXC2 JASPAR yes 112246096
Genes associated with rs191238618[chr19:5942723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More