EnhancerDB
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  3. rs191441556[chr16:85239027]
Enhancers that have rs191441556[chr16:85239027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs191441556[chr16:85239027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85237690 85239823 TCF7L2 GTRD no Colon (HCT116) 21721104
chr16 85237856 85239829 ZNF143 GTRD no Epithelial (MCF-7) 21721108
chr16 85238003 85239142 TCF7L2 GTRD no Colon (HCT116) 21721115
chr16 85238143 85239039 ZNF274 GTRD no Bone Marrow (K562) 21721118
chr16 85238881 85239547 TCF7L2 GTRD no Colon (HCT116) 21721129
chr16 85239008 85239960 TCF7L2 GTRD no Colon (HCT116) 21721130
chr16 85239016 85239027 NFE2 JASPAR yes 12032398
chr16 85239017 85239028 FOSL2 JASPAR yes 12032399
chr16 85239024 85239034 SP1 JASPAR yes 12032400
Genes associated with rs191441556[chr16:85239027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More