EnhancerDB
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  3. rs191540426[chr17:43367156]
Enhancers that have rs191540426[chr17:43367156]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs191540426[chr17:43367156]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43366625 43367514 TCF7L2 GTRD no Colon (HCT116) 21763787
chr17 43366652 43370488 ZNF274 GTRD no Blood (GM12878) 21763788
chr17 43366660 43370501 ZNF274 GTRD no Liver (HepG2) 21763789
chr17 43366695 43367171 ZNF274 GTRD no Blood (GM12878) 21763790
chr17 43366695 43369600 ZNF274 GTRD no Blood (GM12878) 21763791
chr17 43366712 43368946 TCF7L2 GTRD no Colon (HCT116) 21763792
chr17 43366878 43368965 ZNF274 GTRD no Bone Marrow (K562) 21763793
chr17 43366904 43369658 TCF7L2 GTRD no Colon (HCT116) 21763794
chr17 43366944 43369466 ZNF143 GTRD no Epithelial (MCF-7) 21763795
chr17 43366949 43369794 ZNF274 GTRD no Blood (GM12878) 21763796
chr17 43367065 43367522 TCF7L2 GTRD no Colon (HCT116) 21763797
chr17 43367073 43368673 ZNF274 GTRD no Blood (GM12878) 21763798
chr17 43367081 43370470 ZNF274 GTRD no Blood (GM12878) 21763799
chr17 43367103 43370279 ZNF274 GTRD no Blood (GM12878) 21763800
chr17 43367145 43367158 SMAD2 JASPAR yes 54439905
Genes associated with rs191540426[chr17:43367156], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More