EnhancerDB
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  3. rs191729227[chr1:52034644]
Enhancers that have rs191729227[chr1:52034644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs191729227[chr1:52034644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52034636 52034650 GLIS2 JASPAR yes 28851952
chr1 52034640 52034646 SP1 TRANSFAC yes 28851953
Genes associated with rs191729227[chr1:52034644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More