EnhancerDB
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  3. rs192025338[chr17:2752649]
Enhancers that have rs192025338[chr17:2752649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs192025338[chr17:2752649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2752632 2752652 RREB1 JASPAR yes 52777009
chr17 2752636 2752656 RREB1 JASPAR yes 52777010
chr17 2752641 2752651 SP1 JASPAR yes 52777011
chr17 2752648 2752653 SP1 TRANSFAC yes 52777012
Genes associated with rs192025338[chr17:2752649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More