EnhancerDB
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  3. rs192180539[chr1:8780520]
Enhancers that have rs192180539[chr1:8780520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs192180539[chr1:8780520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8780514 8780524 GSC2 JASPAR yes 26591358
chr1 8780515 8780523 OTX1 JASPAR yes 26591359
chr1 8780515 8780523 OTX2 JASPAR yes 26591360
chr1 8780520 8780528 FOXL1 JASPAR yes 26591361
Genes associated with rs192180539[chr1:8780520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More