EnhancerDB
  1. Home
  2. SNP
  3. rs192406426[chr1:19800603]
Enhancers that have rs192406426[chr1:19800603]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs192406426[chr1:19800603]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19800588 19800606 RARA JASPAR yes 27195598
chr1 19800594 19800605 E2F6 JASPAR yes 27195599
chr1 19800597 19800605 TBX15 JASPAR yes 27195600
Genes associated with rs192406426[chr1:19800603], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More