EnhancerDB
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  3. rs192462249[chr2:232554782]
Enhancers that have rs192462249[chr2:232554782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs192462249[chr2:232554782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232554778 232554783 SP1 TRANSFAC yes 81737060
chr2 232554779 232554784 SP1 TRANSFAC yes 81737061
chr2 232554782 232554795 NFKB1 JASPAR yes 81737062
Genes associated with rs192462249[chr2:232554782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More