EnhancerDB
  1. Home
  2. SNP
  3. rs192491440[chr18:55890959]
Enhancers that have rs192491440[chr18:55890959]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs192491440[chr18:55890959]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55890841 55891553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824046
chr18 55890841 55891553 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338163
chr18 55890880 55891240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824047
chr18 55890880 55891240 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338164
chr18 55890887 55891291 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824048
chr18 55890887 55891291 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338165
chr18 55890890 55891180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824049
chr18 55890890 55891180 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338166
chr18 55890945 55891145 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108338167
chr18 55890946 55891330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824050
chr18 55890946 55891330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338168
chr18 55890947 55891140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21824051
chr18 55890947 55891140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108338169
chr18 55890949 55890962 SCRT2 JASPAR yes 110928988
chr18 55890949 55890964 SCRT1 JASPAR yes 110928989
chr18 55890953 55890962 SNAI2 JASPAR yes 110928990
chr18 55890953 55890963 FIGLA JASPAR yes 110928991
chr18 55890953 55890963 TCF3 JASPAR yes 110928992
chr18 55890953 55890963 TCF4 JASPAR yes 110928993
chr18 55890955 55890964 ZEB1 JASPAR yes 110928994
chr18 55890957 55890962 SP1 TRANSFAC yes 110928995
chr18 55890957 55891247 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108338170
Genes associated with rs192491440[chr18:55890959], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More