EnhancerDB
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  3. rs192540172[chr3:185462028]
Enhancers that have rs192540172[chr3:185462028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs192540172[chr3:185462028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185462019 185462029 HOXB13 JASPAR yes 8282978
chr3 185462019 185462029 HOXD13 JASPAR yes 8282979
chr3 185462023 185462039 SOX8 JASPAR yes 8282980
chr3 185462028 185462038 HOXA13 JASPAR yes 8282981
chr3 185462028 185462038 HOXB13 JASPAR yes 8282982
chr3 185462028 185462038 HOXD13 JASPAR yes 8282983
chr3 185462028 185462039 HOXA10 JASPAR yes 8282984
Genes associated with rs192540172[chr3:185462028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More