EnhancerDB
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  3. rs192544677[chr1:173373250]
Enhancers that have rs192544677[chr1:173373250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs192544677[chr1:173373250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173373235 173373254 PAX5 JASPAR yes 33195565
chr1 173373236 173373256 ESR1 JASPAR yes 33195566
chr1 173373239 173373257 ESR1 JASPAR yes 33195567
chr1 173373240 173373258 ESR2 JASPAR yes 33195568
chr1 173373241 173373256 ESR2 JASPAR yes 33195569
Genes associated with rs192544677[chr1:173373250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More