EnhancerDB
  1. Home
  2. SNP
  3. rs193068368[chr1:41880596]
Enhancers that have rs193068368[chr1:41880596]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs193068368[chr1:41880596]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41880583 41880598 RFX5 JASPAR yes 28387368
chr1 41880588 41880601 SCRT2 JASPAR yes 28387369
chr1 41880588 41880603 SCRT1 JASPAR yes 28387370
chr1 41880596 41880600 H4TF2 TRANSFAC yes 28387371
Genes associated with rs193068368[chr1:41880596], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More