EnhancerDB
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  3. rs193140990[chr1:117417969]
Enhancers that have rs193140990[chr1:117417969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs193140990[chr1:117417969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117417967 117417977 ALX3 JASPAR yes 31847442
chr1 117417967 117417977 LBX2 JASPAR yes 31847443
chr1 117417967 117417977 MIXL1 JASPAR yes 31847444
chr1 117417968 117417976 LHX9 JASPAR yes 31847445
chr1 117417968 117417976 SHOX JASPAR yes 31847446
Genes associated with rs193140990[chr1:117417969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More