EnhancerDB
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  3. rs193196324[chr1:27776183]
Enhancers that have rs193196324[chr1:27776183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs193196324[chr1:27776183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27776177 27776183 SOX10 JASPAR yes 27695697
chr1 27776179 27776193 GATA2 JASPAR yes 27695698
chr1 27776181 27776189 GATA3 JASPAR yes 27695699
chr1 27776181 27776189 GATA5 JASPAR yes 27695700
Genes associated with rs193196324[chr1:27776183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More