EnhancerDB
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  3. rs193227377[chr5:172289167]
Enhancers that have rs193227377[chr5:172289167]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs193227377[chr5:172289167]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172289156 172289170 POU1F1 JASPAR yes 67836098
chr5 172289162 172289177 MEF2A JASPAR yes 67836100
chr5 172289163 172289178 MEF2C JASPAR yes 67836101
chr5 172289164 172289176 MEF2A JASPAR yes 67836102
chr5 172289164 172289176 MEF2B JASPAR yes 67836103
chr5 172289164 172289176 MEF2D JASPAR yes 67836104
chr5 172289165 172289175 MEF2A JASPAR yes 67836105
chr5 172289166 172289170 YY1 TRANSFAC yes 67836106
Genes associated with rs193227377[chr5:172289167], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More