EnhancerDB
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  3. rs193230331[chr17:80509851]
Enhancers that have rs193230331[chr17:80509851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs193230331[chr17:80509851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80509841 80509853 NHLH1 JASPAR yes 56373901
chr17 80509842 80509852 ID4 JASPAR yes 56373902
chr17 80509842 80509852 NHLH1 JASPAR yes 56373903
chr17 80509842 80509852 TCF3 JASPAR yes 56373904
chr17 80509842 80509852 TCF4 JASPAR yes 56373905
chr17 80509843 80509852 SNAI2 JASPAR yes 56373906
chr17 80509848 80509864 ZNF143 JASPAR yes 56373908
Genes associated with rs193230331[chr17:80509851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More