EnhancerDB
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  3. rs193289866[chr12:52365825]
Enhancers that have rs193289866[chr12:52365825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52362566 52373215 enh14724
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs193289866[chr12:52365825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52365813 52365833 RREB1 JASPAR yes 120911268
chr12 52365813 52365834 IRF1 JASPAR yes 120911269
chr12 52365817 52365832 IRF9 JASPAR yes 120911270
chr12 52365819 52365840 IRF1 JASPAR yes 120911271
chr12 52365820 52365826 TCF4 TRANSFAC yes 120911272
chr12 52365820 52365835 FOXP1 JASPAR yes 120911273
chr12 52365823 52365835 IRF1 JASPAR yes 120911274
chr12 52365825 52365831 TCF4 TRANSFAC yes 120911275
chr12 52365825 52365840 FOXP1 JASPAR yes 120911276
chr12 52365825 52365840 MEF2C JASPAR yes 120911277
Genes associated with rs193289866[chr12:52365825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More