EnhancerDB
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  3. rs1933518[chr6:88443022]
Enhancers that have rs1933518[chr6:88443022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1933518[chr6:88443022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88443015 88443025 TBX21 JASPAR yes 103326599
chr6 88443015 88443026 TBX20 JASPAR yes 103326600
chr6 88443015 88443026 TBX2 JASPAR yes 103326601
chr6 88443015 88443028 EOMES JASPAR yes 103326602
chr6 88443016 88443024 MGA JASPAR yes 103326603
chr6 88443016 88443024 TBX15 JASPAR yes 103326604
chr6 88443016 88443024 TBX1 JASPAR yes 103326605
chr6 88443016 88443024 TBX4 JASPAR yes 103326606
chr6 88443016 88443024 TBX5 JASPAR yes 103326607
chr6 88443016 88443026 TBR1 JASPAR yes 103326608
Genes associated with rs1933518[chr6:88443022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 88384790 88411927 - AKIRIN2 ENSG00000135334.8 88411927 31095 Esophagus 0.112018 6793