EnhancerDB
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  3. rs1933519[chr6:88443127]
Enhancers that have rs1933519[chr6:88443127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1933519[chr6:88443127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88443115 88443136 IRF1 JASPAR yes 103326623
chr6 88443117 88443132 IRF9 JASPAR yes 103326624
chr6 88443118 88443132 IRF7 JASPAR yes 103326625
chr6 88443119 88443134 PRDM1 JASPAR yes 103326626
chr6 88443119 88443137 IRF2 JASPAR yes 103326627
chr6 88443120 88443132 IRF1 JASPAR yes 103326628
chr6 88443121 88443135 POU1F1 JASPAR yes 103326629
chr6 88443121 88443136 FOXP1 JASPAR yes 103326630
chr6 88443121 88443136 MEF2C JASPAR yes 103326631
chr6 88443122 88443135 POU2F2 JASPAR yes 103326632
chr6 88443123 88443134 FOXC1 JASPAR yes 103326633
chr6 88443123 88443135 FOXC2 JASPAR yes 103326634
Genes associated with rs1933519[chr6:88443127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More