EnhancerDB
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  3. rs1965225[chr3:150062592]
Enhancers that have rs1965225[chr3:150062592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150057777 150071992 enh21028
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1965225[chr3:150062592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150062573 150062593 RREB1 JASPAR yes 6565430
chr3 150062573 150062594 IRF1 JASPAR yes 6565431
chr3 150062574 150062595 IRF1 JASPAR yes 6565434
chr3 150062578 150062598 RREB1 JASPAR yes 6565437
chr3 150062579 150062600 IRF1 JASPAR yes 6565438
chr3 150062580 150062595 FOXP1 JASPAR yes 6565440
chr3 150062581 150062592 FOXP2 JASPAR yes 6565441
chr3 150062581 150062593 FOXC2 JASPAR yes 6565442
chr3 150062581 150062601 RREB1 JASPAR yes 6565443
chr3 150062583 150062603 RREB1 JASPAR yes 6565444
chr3 150062586 150062606 RREB1 JASPAR yes 6565445
chr3 150062590 150062596 TCF4 TRANSFAC yes 6565446
Genes associated with rs1965225[chr3:150062592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More