EnhancerDB
  1. Home
  2. SNP
  3. rs1972216[chr1:158000740]
Enhancers that have rs1972216[chr1:158000740]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs1972216[chr1:158000740]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 158000737 158000746 PITX3 JASPAR yes 32459906
chr1 158000737 158000747 GSC JASPAR yes 32459907
chr1 158000737 158000752 SOX21 JASPAR yes 32459908
chr1 158000737 158000753 SOX4 JASPAR yes 32459909
chr1 158000738 158000746 RHOXF1 JASPAR yes 32459910
Genes associated with rs1972216[chr1:158000740], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More