EnhancerDB
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  3. rs1975049[chr5:77813236]
Enhancers that have rs1975049[chr5:77813236]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1975049[chr5:77813236]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77813230 77813242 YY1 JASPAR yes 63595475
chr5 77813230 77813248 ESR1 JASPAR yes 63595476
chr5 77813231 77813246 ESR2 JASPAR yes 63595477
chr5 77813234 77813249 PRDM1 JASPAR yes 63595478
chr5 77813235 77813239 YY1 TRANSFAC yes 63595479
Genes associated with rs1975049[chr5:77813236], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More