EnhancerDB
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  3. rs1978778[chr3:149270904]
Enhancers that have rs1978778[chr3:149270904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149269565 149284575 enh21021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Breast Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs1978778[chr3:149270904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149270896 149270907 DUX4 JASPAR yes 6504161
chr3 149270896 149270907 PHOX2A JASPAR yes 6504162
chr3 149270896 149270907 PROP1 JASPAR yes 6504163
chr3 149270902 149270917 MEF2C JASPAR yes 6504164
Genes associated with rs1978778[chr3:149270904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More