EnhancerDB
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  3. rs1979988[chr17:828226]
Enhancers that have rs1979988[chr17:828226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 815865 843495 enh32037
Skin (Keratinocyte) Liver (HepG2) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs1979988[chr17:828226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 828211 828232 IRF1 JASPAR yes 52640771
chr17 828215 828230 PRDM1 JASPAR yes 52640773
chr17 828215 828230 STAT2 JASPAR yes 52640774
chr17 828219 828233 STAT1 JASPAR yes 52640776
Genes associated with rs1979988[chr17:828226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More