EnhancerDB
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  3. rs199531647[chr16:25010720]
Enhancers that have rs199531647[chr16:25010720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199531647[chr16:25010720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25010707 25010720 SCRT2 JASPAR yes 10094112
chr16 25010707 25010722 SCRT1 JASPAR yes 10094113
chr16 25010711 25010720 SNAI2 JASPAR yes 10094114
chr16 25010711 25010721 FIGLA JASPAR yes 10094115
chr16 25010711 25010721 ID4 JASPAR yes 10094116
chr16 25010711 25010721 MSC JASPAR yes 10094117
chr16 25010711 25010721 TCF3 JASPAR yes 10094118
chr16 25010711 25010721 TCF4 JASPAR yes 10094119
chr16 25010718 25010733 FOXA1 JASPAR yes 10094120
chr16 25010719 25010731 FOXI1 JASPAR yes 10094121
chr16 25010719 25010733 POU4F1 JASPAR yes 10094122
chr16 25010719 25010734 FOXP1 JASPAR yes 10094123
chr16 25010719 25010734 HNF1A JASPAR yes 10094124
chr16 25010720 25010732 FOXC2 JASPAR yes 10094125
chr16 25010720 25010734 ONECUT2 JASPAR yes 10094126
chr16 25010720 25010734 ONECUT3 JASPAR yes 10094127
Genes associated with rs199531647[chr16:25010720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More