EnhancerDB
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  3. rs199538666[chr17:65467630]
Enhancers that have rs199538666[chr17:65467630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs199538666[chr17:65467630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65467624 65467639 RUNX2 JASPAR yes 55508230
chr17 65467627 65467638 RUNX1 JASPAR yes 55508231
chr17 65467628 65467638 RUNX3 JASPAR yes 55508232
chr17 65467629 65467638 RUNX2 JASPAR yes 55508233
Genes associated with rs199538666[chr17:65467630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More