EnhancerDB
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  3. rs199544649[chr1:8327258]
Enhancers that have rs199544649[chr1:8327258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8315293 8338815 enh11468
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Thyroid Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs199544649[chr1:8327258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8327246 8327267 IRF1 JASPAR yes 26537130
chr1 8327247 8327268 IRF1 JASPAR yes 26537131
chr1 8327248 8327263 STAT2 JASPAR yes 26537132
chr1 8327249 8327270 IRF1 JASPAR yes 26537133
chr1 8327250 8327271 IRF1 JASPAR yes 26537134
chr1 8327251 8327266 FOXP1 JASPAR yes 26537135
chr1 8327251 8327272 IRF1 JASPAR yes 26537136
chr1 8327252 8327267 FOXP1 JASPAR yes 26537137
chr1 8327252 8327273 IRF1 JASPAR yes 26537138
chr1 8327253 8327268 FOXP1 JASPAR yes 26537139
chr1 8327253 8327274 IRF1 JASPAR yes 26537140
chr1 8327254 8327269 FOXP1 JASPAR yes 26537141
chr1 8327254 8327275 IRF1 JASPAR yes 26537142
chr1 8327255 8327270 FOXP1 JASPAR yes 26537143
chr1 8327256 8327271 FOXP1 JASPAR yes 26537144
chr1 8327257 8327272 FOXP1 JASPAR yes 26537145
chr1 8327258 8327273 FOXP1 JASPAR yes 26537146
Genes associated with rs199544649[chr1:8327258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More