EnhancerDB
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  3. rs199549220[chr17:36593872]
Enhancers that have rs199549220[chr17:36593872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 36581363 36609795 enh17126
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs199549220[chr17:36593872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 36593854 36593874 RREB1 JASPAR yes 54113867
chr17 36593855 36593875 RREB1 JASPAR yes 54113868
chr17 36593858 36593878 RREB1 JASPAR yes 54113871
chr17 36593859 36593879 RREB1 JASPAR yes 54113872
chr17 36593862 36593878 GLIS1 JASPAR yes 54113873
chr17 36593863 36593877 E2F7 JASPAR yes 54113874
chr17 36593863 36593877 GLIS2 JASPAR yes 54113875
chr17 36593864 36593874 SP1 JASPAR yes 54113876
chr17 36593864 36593874 ZNF740 JASPAR yes 54113877
chr17 36593864 36593884 RREB1 JASPAR yes 54113878
chr17 36593865 36593875 ZNF740 JASPAR yes 54113879
chr17 36593866 36593876 ZNF740 JASPAR yes 54113880
Genes associated with rs199549220[chr17:36593872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More