EnhancerDB
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  3. rs199562104[chr1:226004053]
Enhancers that have rs199562104[chr1:226004053]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225998865 226010784 enh12726
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199562104[chr1:226004053]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226004045 226004066 IRF1 JASPAR yes 35771135
chr1 226004049 226004063 SPIC JASPAR yes 35771137
chr1 226004049 226004064 PRDM1 JASPAR yes 35771138
Genes associated with rs199562104[chr1:226004053], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More