EnhancerDB
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  3. rs199572831[chr5:172291582]
Enhancers that have rs199572831[chr5:172291582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199572831[chr5:172291582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172291576 172291582 ESR1 TRANSFAC yes 67836466
chr5 172291578 172291582 ESR1 TRANSFAC yes 67836467
chr5 172291581 172291595 STAT1 JASPAR yes 67836468
chr5 172291581 172291596 PRDM1 JASPAR yes 67836469
chr5 172291581 172291596 STAT2 JASPAR yes 67836470
Genes associated with rs199572831[chr5:172291582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More