EnhancerDB
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  3. rs199580171[chr17:2755902]
Enhancers that have rs199580171[chr17:2755902]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs199580171[chr17:2755902]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2755883 2755904 IRF1 JASPAR yes 52777525
chr17 2755884 2755904 RREB1 JASPAR yes 52777526
chr17 2755889 2755904 FOXP1 JASPAR yes 52777527
chr17 2755889 2755909 RREB1 JASPAR yes 52777528
chr17 2755889 2755910 IRF1 JASPAR yes 52777529
chr17 2755891 2755911 RREB1 JASPAR yes 52777530
chr17 2755893 2755908 STAT2 JASPAR yes 52777531
chr17 2755894 2755906 IRF1 JASPAR yes 52777532
chr17 2755894 2755909 FOXP1 JASPAR yes 52777533
chr17 2755896 2755916 RREB1 JASPAR yes 52777534
chr17 2755899 2755919 RREB1 JASPAR yes 52777535
chr17 2755902 2755922 RREB1 JASPAR yes 52777536
Genes associated with rs199580171[chr17:2755902], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More