EnhancerDB
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  3. rs199673726[chr16:88823725]
Enhancers that have rs199673726[chr16:88823725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199673726[chr16:88823725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88823716 88823736 RREB1 JASPAR yes 12300395
chr16 88823720 88823740 RREB1 JASPAR yes 12300396
chr16 88823721 88823741 RREB1 JASPAR yes 12300397
chr16 88823724 88823729 SP1 TRANSFAC yes 12300398
chr16 88823724 88823730 SP1 TRANSFAC yes 12300399
chr16 88823724 88823734 SP1 JASPAR yes 12300400
chr16 88823724 88823744 RREB1 JASPAR yes 12300401
chr16 88823725 88823735 SP1 JASPAR yes 12300402
chr16 88823725 88823735 ZNF740 JASPAR yes 12300403
Genes associated with rs199673726[chr16:88823725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More