EnhancerDB
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  3. rs199758740[chr1:39859911]
Enhancers that have rs199758740[chr1:39859911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs199758740[chr1:39859911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39859908 39859912 YY1 TRANSFAC yes 28272905
chr1 39859910 39859922 PBX1 JASPAR yes 28272906
chr1 39859911 39859925 ONECUT2 JASPAR yes 28272907
chr1 39859911 39859925 ONECUT3 JASPAR yes 28272908
Genes associated with rs199758740[chr1:39859911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More