EnhancerDB
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  3. rs199785573[chr6:44023467]
Enhancers that have rs199785573[chr6:44023467]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199785573[chr6:44023467]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44023455 44023476 IRF1 JASPAR yes 101818326
chr6 44023459 44023471 IRF1 JASPAR yes 101818327
chr6 44023461 44023482 IRF1 JASPAR yes 101818328
chr6 44023462 44023483 IRF1 JASPAR yes 101818329
chr6 44023464 44023468 YY1 TRANSFAC yes 101818330
chr6 44023464 44023479 FOXP1 JASPAR yes 101818331
chr6 44023467 44023482 MEF2A JASPAR yes 101818332
Genes associated with rs199785573[chr6:44023467], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More