EnhancerDB
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  3. rs199807874[chr1:24608961]
Enhancers that have rs199807874[chr1:24608961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs199807874[chr1:24608961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24608945 24608965 RREB1 JASPAR yes 27495335
chr1 24608954 24608970 GLIS1 JASPAR yes 27495336
chr1 24608955 24608969 GLIS2 JASPAR yes 27495337
chr1 24608957 24608967 ZNF740 JASPAR yes 27495338
chr1 24608958 24608968 SP1 JASPAR yes 27495339
chr1 24608958 24608968 ZNF740 JASPAR yes 27495340
Genes associated with rs199807874[chr1:24608961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More