EnhancerDB
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  3. rs199827177[chr3:150457220]
Enhancers that have rs199827177[chr3:150457220]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 150436865 150479875 enh7626
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs199827177[chr3:150457220]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 150457209 150457230 IRF1 JASPAR yes 6589482
chr3 150457210 150457231 IRF1 JASPAR yes 6589483
chr3 150457211 150457226 PRDM1 JASPAR yes 6589484
chr3 150457211 150457226 STAT2 JASPAR yes 6589485
chr3 150457214 150457235 IRF1 JASPAR yes 6589486
chr3 150457215 150457230 FOXP1 JASPAR yes 6589487
chr3 150457216 150457231 STAT2 JASPAR yes 6589488
chr3 150457220 150457235 FOXP1 JASPAR yes 6589489
Genes associated with rs199827177[chr3:150457220], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More