EnhancerDB
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  3. rs199828452[chr12:46808051]
Enhancers that have rs199828452[chr12:46808051]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46792249 46810655 enh47577
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs199828452[chr12:46808051]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46808046 46808067 IRF1 JASPAR yes 120618202
chr12 46808050 46808062 IRF1 JASPAR yes 120618203
chr12 46808050 46808064 IRF7 JASPAR yes 120618204
chr12 46808050 46808065 IRF9 JASPAR yes 120618205
Genes associated with rs199828452[chr12:46808051], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More